diff --git a/internal/api/resolver_mutation_scene.go b/internal/api/resolver_mutation_scene.go
index 67f72262b..b04d8dd90 100644
--- a/internal/api/resolver_mutation_scene.go
+++ b/internal/api/resolver_mutation_scene.go
@@ -560,9 +560,16 @@ func (r *mutationResolver) SceneMerge(ctx context.Context, input SceneMergeInput
 		values = &v
 	}
 
+	mgr := manager.GetInstance()
+	fileDeleter := &scene.FileDeleter{
+		Deleter:        file.NewDeleter(),
+		FileNamingAlgo: mgr.Config.GetVideoFileNamingAlgorithm(),
+		Paths:          mgr.Paths,
+	}
+
 	var ret *models.Scene
 	if err := r.withTxn(ctx, func(ctx context.Context) error {
-		if err := r.Resolver.sceneService.Merge(ctx, srcIDs, destID, *values); err != nil {
+		if err := r.Resolver.sceneService.Merge(ctx, srcIDs, destID, *values, fileDeleter); err != nil {
 			return err
 		}
 
diff --git a/internal/manager/repository.go b/internal/manager/repository.go
index fa0c865c6..4cec8b8fb 100644
--- a/internal/manager/repository.go
+++ b/internal/manager/repository.go
@@ -11,7 +11,7 @@ import (
 type SceneService interface {
 	Create(ctx context.Context, input *models.Scene, fileIDs []models.FileID, coverImage []byte) (*models.Scene, error)
 	AssignFile(ctx context.Context, sceneID int, fileID models.FileID) error
-	Merge(ctx context.Context, sourceIDs []int, destinationID int, values models.ScenePartial) error
+	Merge(ctx context.Context, sourceIDs []int, destinationID int, values models.ScenePartial, fileDeleter *scene.FileDeleter) error
 	Destroy(ctx context.Context, scene *models.Scene, fileDeleter *scene.FileDeleter, deleteGenerated, deleteFile bool) error
 }
 
diff --git a/pkg/scene/merge.go b/pkg/scene/merge.go
index 8b6c9f515..4299331d1 100644
--- a/pkg/scene/merge.go
+++ b/pkg/scene/merge.go
@@ -14,7 +14,13 @@ import (
 	"github.com/stashapp/stash/pkg/txn"
 )
 
-func (s *Service) Merge(ctx context.Context, sourceIDs []int, destinationID int, scenePartial models.ScenePartial) error {
+func (s *Service) Merge(
+	ctx context.Context,
+	sourceIDs []int,
+	destinationID int,
+	scenePartial models.ScenePartial,
+	fileDeleter *FileDeleter,
+) error {
 	// ensure source ids are unique
 	sourceIDs = sliceutil.AppendUniques(nil, sourceIDs)
 
@@ -36,8 +42,6 @@ func (s *Service) Merge(ctx context.Context, sourceIDs []int, destinationID int,
 	var fileIDs []models.FileID
 
 	for _, src := range sources {
-		// TODO - delete generated files as needed
-
 		if err := src.LoadRelationships(ctx, s.Repository); err != nil {
 			return fmt.Errorf("loading scene relationships from %d: %w", src.ID, err)
 		}
@@ -71,9 +75,11 @@ func (s *Service) Merge(ctx context.Context, sourceIDs []int, destinationID int,
 	}
 
 	// delete old scenes
-	for _, srcID := range sourceIDs {
-		if err := s.Repository.Destroy(ctx, srcID); err != nil {
-			return fmt.Errorf("deleting scene %d: %w", srcID, err)
+	for _, src := range sources {
+		const deleteGenerated = true
+		const deleteFile = false
+		if err := s.Destroy(ctx, src, fileDeleter, deleteGenerated, deleteFile); err != nil {
+			return fmt.Errorf("deleting scene %d: %w", src.ID, err)
 		}
 	}